Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.85■□□□□ 0.77
Dnmt3aO88508 Gm43137-201ENSMUST00000198052 594 ntBASIC19.85■□□□□ 0.77
Dnmt3aO88508 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.84■□□□□ 0.77
Dnmt3aO88508 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.83■□□□□ 0.77
Dnmt3aO88508 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dnmt3aO88508 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Dnmt3aO88508 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Dnmt3aO88508 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Dnmt3aO88508 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Dnmt3aO88508 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.83■□□□□ 0.76
Dnmt3aO88508 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Dnmt3aO88508 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dnmt3aO88508 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.81■□□□□ 0.76
Dnmt3aO88508 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dnmt3aO88508 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Dnmt3aO88508 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.79■□□□□ 0.76
Dnmt3aO88508 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Gm45417-201ENSMUST00000209533 758 ntBASIC19.79■□□□□ 0.76
Dnmt3aO88508 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Dnmt3aO88508 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Dnmt3aO88508 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnmt3aO88508 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnmt3aO88508 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3aO88508 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3aO88508 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3aO88508 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Dnmt3aO88508 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3aO88508 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnmt3aO88508 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms