Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp8O70138 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp8O70138 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Mmp8O70138 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp8O70138 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp8O70138 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Mmp8O70138 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp8O70138 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.34■■□□□ 1.49
Mmp8O70138 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp8O70138 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp8O70138 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Mmp8O70138 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp8O70138 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp8O70138 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.33■■□□□ 1.49
Mmp8O70138 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.33■■□□□ 1.49
Mmp8O70138 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Mmp8O70138 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.32■■□□□ 1.48
Mmp8O70138 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.32■■□□□ 1.48
Mmp8O70138 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.32■■□□□ 1.48
Mmp8O70138 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp8O70138 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Gm6139-201ENSMUST00000079261 882 ntBASIC24.31■■□□□ 1.48
Mmp8O70138 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.31■■□□□ 1.48
Mmp8O70138 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.31■■□□□ 1.48
Mmp8O70138 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mmp8O70138 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Gm34220-201ENSMUST00000223001 2709 ntBASIC24.3■■□□□ 1.48
Mmp8O70138 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Gm43173-201ENSMUST00000202246 593 ntBASIC24.3■■□□□ 1.48
Mmp8O70138 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Gm6802-201ENSMUST00000167843 1983 ntBASIC24.3■■□□□ 1.48
Mmp8O70138 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp8O70138 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp8O70138 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp8O70138 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.29■■□□□ 1.48
Mmp8O70138 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.29■■□□□ 1.48
Mmp8O70138 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.29■■□□□ 1.48
Mmp8O70138 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Mmp8O70138 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mmp8O70138 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Mmp8O70138 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC24.28■■□□□ 1.48
Mmp8O70138 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Mmp8O70138 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp8O70138 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.27■■□□□ 1.48
Mmp8O70138 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp8O70138 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Mmp8O70138 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp8O70138 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mmp8O70138 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Mmp8O70138 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.26■■□□□ 1.47
Mmp8O70138 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp8O70138 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp8O70138 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.26■■□□□ 1.47
Mmp8O70138 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp8O70138 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp8O70138 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Mmp8O70138 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Mmp8O70138 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.25■■□□□ 1.47
Mmp8O70138 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Mmp8O70138 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
Mmp8O70138 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
Mmp8O70138 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Mmp8O70138 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mmp8O70138 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp8O70138 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp8O70138 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp8O70138 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp8O70138 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mmp8O70138 Gm8493-201ENSMUST00000196881 489 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms