Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Lnp1A0A1B0GSK3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lnp1A0A1B0GSK3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Golgb1-201ENSMUST00000023534 498 ntBASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lnp1A0A1B0GSK3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.46■□□□□ 0.23
Lnp1A0A1B0GSK3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lnp1A0A1B0GSK3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lnp1A0A1B0GSK3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Mir6236-201ENSMUST00000184437 123 ntBASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lnp1A0A1B0GSK3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lnp1A0A1B0GSK3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Gm12922-201ENSMUST00000120626 809 ntBASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lnp1A0A1B0GSK3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms