Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv5-45A0A0B4J1J1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv5-45A0A0B4J1J1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.44■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.4■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.4■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv5-45A0A0B4J1J1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igkv5-45A0A0B4J1J1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.39■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv5-45A0A0B4J1J1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms