Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-3A0A075B6B3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Trav6d-3A0A075B6B3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-3A0A075B6B3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-3A0A075B6B3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Iqck-206ENSMUST00000208658 2891 ntBASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm15820-201ENSMUST00000201566 728 ntBASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-3A0A075B6B3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm7417-201ENSMUST00000192950 473 ntBASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-3A0A075B6B3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-3A0A075B6B3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Etf1-202ENSMUST00000180351 108 ntBASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-3A0A075B6B3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms