Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-7A0A075B6B0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.24■□□□□ 0.03
Trav6d-7A0A075B6B0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-7A0A075B6B0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-7A0A075B6B0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-7A0A075B6B0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav6d-7A0A075B6B0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav6d-7A0A075B6B0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6d-7A0A075B6B0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav6d-7A0A075B6B0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-7A0A075B6B0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-7A0A075B6B0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms