Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Gm24970-201ENSMUST00000175582 82 ntBASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mbd3l1Q9D9H3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mbd3l1Q9D9H3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Mbd3l1Q9D9H3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mbd3l1Q9D9H3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mbd3l1Q9D9H3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mbd3l1Q9D9H3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mbd3l1Q9D9H3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mbd3l1Q9D9H3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mbd3l1Q9D9H3 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mbd3l1Q9D9H3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms