Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.32■□□□□ 0.52
Q9CR55 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Q9CR55 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Q9CR55 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
Q9CR55 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.31■□□□□ 0.52
Q9CR55 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q9CR55 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Q9CR55 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CR55 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Q9CR55 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.3■□□□□ 0.52
Q9CR55 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Q9CR55 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.3■□□□□ 0.52
Q9CR55 Gm12366-201ENSMUST00000121722 873 ntBASIC18.3■□□□□ 0.52
Q9CR55 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.3■□□□□ 0.52
Q9CR55 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.3■□□□□ 0.52
Q9CR55 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.3■□□□□ 0.52
Q9CR55 Gm5786-201ENSMUST00000085368 882 ntBASIC18.3■□□□□ 0.52
Q9CR55 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CR55 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
Q9CR55 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.29■□□□□ 0.52
Q9CR55 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.29■□□□□ 0.52
Q9CR55 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Q9CR55 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.29■□□□□ 0.52
Q9CR55 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Q9CR55 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CR55 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9CR55 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q9CR55 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q9CR55 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Q9CR55 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9CR55 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Q9CR55 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9CR55 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.28■□□□□ 0.52
Q9CR55 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Q9CR55 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Q9CR55 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9CR55 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.27■□□□□ 0.52
Q9CR55 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Q9CR55 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.27■□□□□ 0.52
Q9CR55 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9CR55 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Q9CR55 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9CR55 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9CR55 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q9CR55 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q9CR55 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.26■□□□□ 0.51
Q9CR55 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.26■□□□□ 0.51
Q9CR55 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Q9CR55 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Q9CR55 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.26■□□□□ 0.51
Q9CR55 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.26■□□□□ 0.51
Q9CR55 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q9CR55 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms