Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdca3Q99M54 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdca3Q99M54 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cdca3Q99M54 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Gm6139-201ENSMUST00000079261 882 ntBASIC18.42■□□□□ 0.54
Cdca3Q99M54 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdca3Q99M54 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdca3Q99M54 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.41■□□□□ 0.54
Cdca3Q99M54 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdca3Q99M54 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdca3Q99M54 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca3Q99M54 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca3Q99M54 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca3Q99M54 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca3Q99M54 Gm43137-201ENSMUST00000198052 594 ntBASIC18.39■□□□□ 0.53
Cdca3Q99M54 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.39■□□□□ 0.53
Cdca3Q99M54 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cdca3Q99M54 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Gm43017-201ENSMUST00000198296 752 ntBASIC18.38■□□□□ 0.53
Cdca3Q99M54 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.38■□□□□ 0.53
Cdca3Q99M54 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca3Q99M54 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.37■□□□□ 0.53
Cdca3Q99M54 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca3Q99M54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Mir7075-201ENSMUST00000184187 82 ntBASIC18.36■□□□□ 0.53
Cdca3Q99M54 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca3Q99M54 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.35■□□□□ 0.53
Cdca3Q99M54 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca3Q99M54 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca3Q99M54 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca3Q99M54 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cdca3Q99M54 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdca3Q99M54 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca3Q99M54 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms