Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lims2Q91XD2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lims2Q91XD2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Lims2Q91XD2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Lims2Q91XD2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.58■□□□□ 0.88
Lims2Q91XD2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lims2Q91XD2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lims2Q91XD2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lims2Q91XD2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lims2Q91XD2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.54■□□□□ 0.88
Lims2Q91XD2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lims2Q91XD2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Lims2Q91XD2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.53■□□□□ 0.88
Lims2Q91XD2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lims2Q91XD2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lims2Q91XD2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Lims2Q91XD2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.53■□□□□ 0.88
Lims2Q91XD2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.53■□□□□ 0.88
Lims2Q91XD2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lims2Q91XD2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lims2Q91XD2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Lims2Q91XD2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lims2Q91XD2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.52■□□□□ 0.88
Lims2Q91XD2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lims2Q91XD2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lims2Q91XD2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lims2Q91XD2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.5■□□□□ 0.87
Lims2Q91XD2 Gm26833-201ENSMUST00000180899 440 ntBASIC20.5■□□□□ 0.87
Lims2Q91XD2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.5■□□□□ 0.87
Lims2Q91XD2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lims2Q91XD2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.49■□□□□ 0.87
Lims2Q91XD2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.49■□□□□ 0.87
Lims2Q91XD2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.48■□□□□ 0.87
Lims2Q91XD2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lims2Q91XD2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lims2Q91XD2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lims2Q91XD2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lims2Q91XD2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lims2Q91XD2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lims2Q91XD2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lims2Q91XD2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms