Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.34■□□□□ 0.69
Q8VDP2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.34■□□□□ 0.69
Q8VDP2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.34■□□□□ 0.69
Q8VDP2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8VDP2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8VDP2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8VDP2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Q8VDP2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8VDP2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8VDP2 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.32■□□□□ 0.68
Q8VDP2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Q8VDP2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.32■□□□□ 0.68
Q8VDP2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.32■□□□□ 0.68
Q8VDP2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8VDP2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8VDP2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8VDP2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8VDP2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q8VDP2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8VDP2 Gm30023-201ENSMUST00000197970 889 ntBASIC19.31■□□□□ 0.68
Q8VDP2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.31■□□□□ 0.68
Q8VDP2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Q8VDP2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Q8VDP2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.3■□□□□ 0.68
Q8VDP2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8VDP2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Q8VDP2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8VDP2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q8VDP2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Q8VDP2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8VDP2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.29■□□□□ 0.68
Q8VDP2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8VDP2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q8VDP2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.28■□□□□ 0.68
Q8VDP2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8VDP2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
Q8VDP2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.27■□□□□ 0.68
Q8VDP2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8VDP2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Q8VDP2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8VDP2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8VDP2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q8VDP2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.27■□□□□ 0.68
Q8VDP2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8VDP2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.27■□□□□ 0.67
Q8VDP2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q8VDP2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q8VDP2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q8VDP2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q8VDP2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8VDP2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q8VDP2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q8VDP2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q8VDP2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Q8VDP2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q8VDP2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Q8VDP2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Q8VDP2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q8VDP2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.24■□□□□ 0.67
Q8VDP2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms