Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cd109Q8R422 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Cd109Q8R422 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC28.64■■■□□ 2.17
Cd109Q8R422 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
Cd109Q8R422 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cd109Q8R422 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC28.63■■■□□ 2.17
Cd109Q8R422 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cd109Q8R422 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC28.62■■■□□ 2.17
Cd109Q8R422 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC28.62■■■□□ 2.17
Cd109Q8R422 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC28.62■■■□□ 2.17
Cd109Q8R422 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
Cd109Q8R422 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cd109Q8R422 Gm10571-201ENSMUST00000097869 1638 ntBASIC28.62■■■□□ 2.17
Cd109Q8R422 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cd109Q8R422 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC28.62■■■□□ 2.17
Cd109Q8R422 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Cd109Q8R422 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Cd109Q8R422 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cd109Q8R422 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cd109Q8R422 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cd109Q8R422 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cd109Q8R422 Gm9988-201ENSMUST00000069786 435 ntBASIC28.61■■■□□ 2.17
Cd109Q8R422 Reep4-203ENSMUST00000226563 1444 ntBASIC28.61■■■□□ 2.17
Cd109Q8R422 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cd109Q8R422 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Cd109Q8R422 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cd109Q8R422 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cd109Q8R422 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC28.6■■■□□ 2.17
Cd109Q8R422 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC28.6■■■□□ 2.17
Cd109Q8R422 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Cd109Q8R422 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cd109Q8R422 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Cd109Q8R422 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
Cd109Q8R422 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Gm13234-201ENSMUST00000120010 747 ntBASIC28.59■■■□□ 2.17
Cd109Q8R422 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cd109Q8R422 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Cd109Q8R422 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Cd109Q8R422 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Cd109Q8R422 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC28.58■■■□□ 2.17
Cd109Q8R422 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cd109Q8R422 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cd109Q8R422 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cd109Q8R422 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC28.56■■■□□ 2.16
Cd109Q8R422 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC28.56■■■□□ 2.16
Cd109Q8R422 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.56■■■□□ 2.16
Cd109Q8R422 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cd109Q8R422 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cd109Q8R422 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cd109Q8R422 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Cd109Q8R422 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC28.55■■■□□ 2.16
Cd109Q8R422 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cd109Q8R422 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cd109Q8R422 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Cd109Q8R422 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cd109Q8R422 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cd109Q8R422 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Cd109Q8R422 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC28.54■■■□□ 2.16
Cd109Q8R422 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Cd109Q8R422 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cd109Q8R422 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cd109Q8R422 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC28.53■■■□□ 2.16
Cd109Q8R422 Dmtn-209ENSMUST00000228295 2572 ntBASIC28.53■■■□□ 2.16
Cd109Q8R422 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cd109Q8R422 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
Cd109Q8R422 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC28.53■■■□□ 2.16
Cd109Q8R422 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cd109Q8R422 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cd109Q8R422 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cd109Q8R422 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC28.52■■■□□ 2.16
Cd109Q8R422 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cd109Q8R422 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cd109Q8R422 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cd109Q8R422 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC28.51■■■□□ 2.15
Cd109Q8R422 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC28.51■■■□□ 2.15
Cd109Q8R422 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC28.51■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms