Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Ebf4Q8K4J2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ebf4Q8K4J2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ebf4Q8K4J2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ebf4Q8K4J2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Gm16437-201ENSMUST00000025669 507 ntBASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ebf4Q8K4J2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ebf4Q8K4J2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ebf4Q8K4J2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf4Q8K4J2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf4Q8K4J2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Ebf4Q8K4J2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ebf4Q8K4J2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Scarna2-201ENSMUST00000157560 414 ntBASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Gm6311-201ENSMUST00000073790 878 ntBASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ebf4Q8K4J2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ebf4Q8K4J2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ebf4Q8K4J2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
Ebf4Q8K4J2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf4Q8K4J2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ebf4Q8K4J2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Gm9806-201ENSMUST00000051080 552 ntBASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ebf4Q8K4J2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms