Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Gm6139-201ENSMUST00000079261 882 ntBASIC20.93■□□□□ 0.94
Scube3Q66PY1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Scube3Q66PY1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Scube3Q66PY1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Scube3Q66PY1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.91■□□□□ 0.94
Scube3Q66PY1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scube3Q66PY1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Spcs1-204ENSMUST00000226782 949 ntBASIC20.9■□□□□ 0.94
Scube3Q66PY1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scube3Q66PY1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scube3Q66PY1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scube3Q66PY1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.89■□□□□ 0.93
Scube3Q66PY1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.89■□□□□ 0.93
Scube3Q66PY1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scube3Q66PY1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Gm8493-201ENSMUST00000196881 489 ntBASIC20.88■□□□□ 0.93
Scube3Q66PY1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Scube3Q66PY1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Scube3Q66PY1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scube3Q66PY1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.86■□□□□ 0.93
Scube3Q66PY1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scube3Q66PY1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 141.2 ms