Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VcanQ62059 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VcanQ62059 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VcanQ62059 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VcanQ62059 Gm11421-201ENSMUST00000122124 294 ntBASIC19.05■□□□□ 0.64
VcanQ62059 Trmt13-210ENSMUST00000198454 880 ntBASIC19.05■□□□□ 0.64
VcanQ62059 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VcanQ62059 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.04■□□□□ 0.64
VcanQ62059 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.04■□□□□ 0.64
VcanQ62059 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VcanQ62059 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VcanQ62059 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VcanQ62059 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Gm5408-201ENSMUST00000197998 747 ntBASIC19.03■□□□□ 0.64
VcanQ62059 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VcanQ62059 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.03■□□□□ 0.64
VcanQ62059 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VcanQ62059 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.02■□□□□ 0.64
VcanQ62059 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VcanQ62059 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.02■□□□□ 0.64
VcanQ62059 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VcanQ62059 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VcanQ62059 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
VcanQ62059 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VcanQ62059 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.02■□□□□ 0.64
VcanQ62059 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.02■□□□□ 0.64
VcanQ62059 Gm9988-201ENSMUST00000069786 435 ntBASIC19.02■□□□□ 0.64
VcanQ62059 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VcanQ62059 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
VcanQ62059 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
VcanQ62059 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
VcanQ62059 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.01■□□□□ 0.63
VcanQ62059 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.01■□□□□ 0.63
VcanQ62059 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.01■□□□□ 0.63
VcanQ62059 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.01■□□□□ 0.63
VcanQ62059 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VcanQ62059 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19■□□□□ 0.63
VcanQ62059 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 AC121577.1-201ENSMUST00000227302 707 ntBASIC19■□□□□ 0.63
VcanQ62059 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Gm27045-201ENSMUST00000182145 1402 ntBASIC19■□□□□ 0.63
VcanQ62059 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VcanQ62059 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VcanQ62059 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VcanQ62059 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VcanQ62059 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VcanQ62059 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VcanQ62059 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VcanQ62059 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VcanQ62059 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VcanQ62059 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VcanQ62059 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VcanQ62059 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VcanQ62059 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.97■□□□□ 0.63
VcanQ62059 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VcanQ62059 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VcanQ62059 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms