Protein–RNA interactions for Protein: Q3UV71

Tmtc1, Transmembrane and TPR repeat-containing protein 1, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc1Q3UV71 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tmtc1Q3UV71 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmtc1Q3UV71 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmtc1Q3UV71 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmtc1Q3UV71 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tmtc1Q3UV71 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Gm5921-201ENSMUST00000075898 882 ntBASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.34■■□□□ 1.01
Tmtc1Q3UV71 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.33■■□□□ 1.01
Tmtc1Q3UV71 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tmtc1Q3UV71 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.33■■□□□ 1.01
Tmtc1Q3UV71 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.33■■□□□ 1.01
Tmtc1Q3UV71 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Tmtc1Q3UV71 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tmtc1Q3UV71 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tmtc1Q3UV71 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tmtc1Q3UV71 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tmtc1Q3UV71 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmtc1Q3UV71 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.3■■□□□ 1
Tmtc1Q3UV71 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tmtc1Q3UV71 Gm10232-201ENSMUST00000089221 720 ntBASIC21.29■■□□□ 1
Tmtc1Q3UV71 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tmtc1Q3UV71 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tmtc1Q3UV71 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tmtc1Q3UV71 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tmtc1Q3UV71 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tmtc1Q3UV71 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmtc1Q3UV71 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.27■■□□□ 1
Tmtc1Q3UV71 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmtc1Q3UV71 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Tmtc1Q3UV71 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmtc1Q3UV71 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tmtc1Q3UV71 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tmtc1Q3UV71 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tmtc1Q3UV71 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tmtc1Q3UV71 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.26■□□□□ 0.99
Tmtc1Q3UV71 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tmtc1Q3UV71 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Tmtc1Q3UV71 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tmtc1Q3UV71 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmtc1Q3UV71 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmtc1Q3UV71 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmtc1Q3UV71 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmtc1Q3UV71 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tmtc1Q3UV71 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tmtc1Q3UV71 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
Tmtc1Q3UV71 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmtc1Q3UV71 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmtc1Q3UV71 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmtc1Q3UV71 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmtc1Q3UV71 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms