Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp25Q3U435 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mmp25Q3U435 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp25Q3U435 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.76■□□□□ 0.59
Mmp25Q3U435 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Gm8493-201ENSMUST00000196881 489 ntBASIC18.76■□□□□ 0.59
Mmp25Q3U435 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.76■□□□□ 0.59
Mmp25Q3U435 Gm6139-201ENSMUST00000079261 882 ntBASIC18.76■□□□□ 0.59
Mmp25Q3U435 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp25Q3U435 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Gm12251-201ENSMUST00000117893 792 ntBASIC18.75■□□□□ 0.59
Mmp25Q3U435 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp25Q3U435 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp25Q3U435 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.74■□□□□ 0.59
Mmp25Q3U435 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Mmp25Q3U435 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp25Q3U435 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Mmp25Q3U435 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.71■□□□□ 0.59
Mmp25Q3U435 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.71■□□□□ 0.59
Mmp25Q3U435 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.71■□□□□ 0.59
Mmp25Q3U435 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Mmp25Q3U435 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Gm43173-201ENSMUST00000202246 593 ntBASIC18.7■□□□□ 0.58
Mmp25Q3U435 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.7■□□□□ 0.58
Mmp25Q3U435 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.7■□□□□ 0.58
Mmp25Q3U435 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.7■□□□□ 0.58
Mmp25Q3U435 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp25Q3U435 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms