Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43aQ3TL54 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim43aQ3TL54 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43aQ3TL54 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43aQ3TL54 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Trim43aQ3TL54 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43aQ3TL54 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.08■□□□□ 0.97
Trim43aQ3TL54 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim43aQ3TL54 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43aQ3TL54 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43aQ3TL54 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.07■□□□□ 0.96
Trim43aQ3TL54 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43aQ3TL54 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim43aQ3TL54 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43aQ3TL54 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43aQ3TL54 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43aQ3TL54 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim43aQ3TL54 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim43aQ3TL54 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms