Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.18■□□□□ 0.82
Thumpd3P97770 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Thumpd3P97770 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.17■□□□□ 0.82
Thumpd3P97770 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Thumpd3P97770 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Thumpd3P97770 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Thumpd3P97770 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Thumpd3P97770 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Thumpd3P97770 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Gm10399-202ENSMUST00000202768 748 ntBASIC20.16■□□□□ 0.82
Thumpd3P97770 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.16■□□□□ 0.82
Thumpd3P97770 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Thumpd3P97770 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Thumpd3P97770 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.15■□□□□ 0.82
Thumpd3P97770 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.15■□□□□ 0.82
Thumpd3P97770 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.15■□□□□ 0.82
Thumpd3P97770 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Thumpd3P97770 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.14■□□□□ 0.82
Thumpd3P97770 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Thumpd3P97770 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thumpd3P97770 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Thumpd3P97770 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thumpd3P97770 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thumpd3P97770 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Thumpd3P97770 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Thumpd3P97770 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.13■□□□□ 0.81
Thumpd3P97770 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Gm22238-201ENSMUST00000175222 88 ntBASIC20.13■□□□□ 0.81
Thumpd3P97770 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.13■□□□□ 0.81
Thumpd3P97770 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Thumpd3P97770 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.12■□□□□ 0.81
Thumpd3P97770 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Thumpd3P97770 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Thumpd3P97770 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Thumpd3P97770 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms