Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Cacna1aP97445 Gm12441-201ENSMUST00000121806 588 ntBASIC18.46■□□□□ 0.55
Cacna1aP97445 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Cacna1aP97445 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.45■□□□□ 0.54
Cacna1aP97445 Gm13148-201ENSMUST00000118892 745 ntBASIC18.45■□□□□ 0.54
Cacna1aP97445 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.45■□□□□ 0.54
Cacna1aP97445 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cacna1aP97445 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacna1aP97445 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1aP97445 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1aP97445 Gm13234-201ENSMUST00000120010 747 ntBASIC18.44■□□□□ 0.54
Cacna1aP97445 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1aP97445 Mir6982-201ENSMUST00000184354 68 ntBASIC18.44■□□□□ 0.54
Cacna1aP97445 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.44■□□□□ 0.54
Cacna1aP97445 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacna1aP97445 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cacna1aP97445 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cacna1aP97445 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Cacna1aP97445 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1aP97445 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.42■□□□□ 0.54
Cacna1aP97445 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cacna1aP97445 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.42■□□□□ 0.54
Cacna1aP97445 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cacna1aP97445 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.42■□□□□ 0.54
Cacna1aP97445 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1aP97445 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cacna1aP97445 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cacna1aP97445 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.41■□□□□ 0.54
Cacna1aP97445 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1aP97445 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1aP97445 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1aP97445 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cacna1aP97445 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cacna1aP97445 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacna1aP97445 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1aP97445 Gm4968-201ENSMUST00000071458 858 ntBASIC18.39■□□□□ 0.53
Cacna1aP97445 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1aP97445 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1aP97445 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1aP97445 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1aP97445 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1aP97445 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cacna1aP97445 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1aP97445 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Cacna1aP97445 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacna1aP97445 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1aP97445 Gm12527-201ENSMUST00000117967 564 ntBASIC18.37■□□□□ 0.53
Cacna1aP97445 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacna1aP97445 Gm20760-201ENSMUST00000179197 648 ntBASIC18.37■□□□□ 0.53
Cacna1aP97445 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1aP97445 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1aP97445 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1aP97445 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms