Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cd27P41272 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cd27P41272 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.02■□□□□ 0.16
Cd27P41272 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.02■□□□□ 0.16
Cd27P41272 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.02■□□□□ 0.16
Cd27P41272 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cd27P41272 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.02■□□□□ 0.15
Cd27P41272 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cd27P41272 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cd27P41272 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Gm27454-201ENSMUST00000185090 204 ntBASIC16.01■□□□□ 0.15
Cd27P41272 Gm43137-201ENSMUST00000198052 594 ntBASIC16.01■□□□□ 0.15
Cd27P41272 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd27P41272 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cd27P41272 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cd27P41272 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cd27P41272 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cd27P41272 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cd27P41272 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cd27P41272 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.99■□□□□ 0.15
Cd27P41272 Gm12251-201ENSMUST00000117893 792 ntBASIC15.99■□□□□ 0.15
Cd27P41272 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.99■□□□□ 0.15
Cd27P41272 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cd27P41272 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd27P41272 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Cd27P41272 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cd27P41272 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cd27P41272 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cd27P41272 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.98■□□□□ 0.15
Cd27P41272 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.98■□□□□ 0.15
Cd27P41272 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.98■□□□□ 0.15
Cd27P41272 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd27P41272 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.98■□□□□ 0.15
Cd27P41272 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.98■□□□□ 0.15
Cd27P41272 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Cd27P41272 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cd27P41272 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cd27P41272 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cd27P41272 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cd27P41272 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd27P41272 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cd27P41272 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cd27P41272 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cd27P41272 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cd27P41272 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cd27P41272 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Cd27P41272 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.95■□□□□ 0.14
Cd27P41272 Gm45417-201ENSMUST00000209533 758 ntBASIC15.95■□□□□ 0.14
Cd27P41272 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cd27P41272 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cd27P41272 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd27P41272 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Cd27P41272 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.94■□□□□ 0.14
Cd27P41272 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cd27P41272 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Cd27P41272 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.94■□□□□ 0.14
Cd27P41272 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cd27P41272 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 220.9 ms