Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm9870-201ENSMUST00000063874 645 ntBASIC18.63■□□□□ 0.57
RetP35546 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RetP35546 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.62■□□□□ 0.57
RetP35546 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RetP35546 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RetP35546 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RetP35546 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.62■□□□□ 0.57
RetP35546 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.62■□□□□ 0.57
RetP35546 Mir7075-201ENSMUST00000184187 82 ntBASIC18.62■□□□□ 0.57
RetP35546 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RetP35546 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RetP35546 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RetP35546 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RetP35546 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RetP35546 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RetP35546 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.61■□□□□ 0.57
RetP35546 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.61■□□□□ 0.57
RetP35546 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
RetP35546 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RetP35546 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RetP35546 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RetP35546 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RetP35546 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RetP35546 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RetP35546 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RetP35546 Gm43017-201ENSMUST00000198296 752 ntBASIC18.6■□□□□ 0.57
RetP35546 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RetP35546 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RetP35546 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RetP35546 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RetP35546 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RetP35546 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Gm29257-201ENSMUST00000186115 639 ntBASIC18.59■□□□□ 0.57
RetP35546 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RetP35546 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.59■□□□□ 0.57
RetP35546 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RetP35546 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.57
RetP35546 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RetP35546 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RetP35546 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RetP35546 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RetP35546 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RetP35546 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.58■□□□□ 0.56
RetP35546 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.58■□□□□ 0.56
RetP35546 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RetP35546 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RetP35546 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RetP35546 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RetP35546 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RetP35546 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
RetP35546 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.56■□□□□ 0.56
RetP35546 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RetP35546 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.55■□□□□ 0.56
RetP35546 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.55■□□□□ 0.56
RetP35546 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RetP35546 Gm5874-201ENSMUST00000096101 508 ntBASIC18.55■□□□□ 0.56
RetP35546 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RetP35546 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RetP35546 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.55■□□□□ 0.56
RetP35546 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.55■□□□□ 0.56
RetP35546 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RetP35546 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.54■□□□□ 0.56
RetP35546 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RetP35546 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms