Protein–RNA interactions for Protein: P19426

Nelfe, Negative elongation factor E, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfeP19426 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NelfeP19426 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.25■□□□□ 0.67
NelfeP19426 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NelfeP19426 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NelfeP19426 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.25■□□□□ 0.67
NelfeP19426 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NelfeP19426 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NelfeP19426 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NelfeP19426 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NelfeP19426 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NelfeP19426 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NelfeP19426 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NelfeP19426 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NelfeP19426 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Smad6-203ENSMUST00000179458 273 ntBASIC19.23■□□□□ 0.67
NelfeP19426 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.23■□□□□ 0.67
NelfeP19426 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NelfeP19426 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.23■□□□□ 0.67
NelfeP19426 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NelfeP19426 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NelfeP19426 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NelfeP19426 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.23■□□□□ 0.67
NelfeP19426 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NelfeP19426 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.22■□□□□ 0.67
NelfeP19426 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NelfeP19426 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NelfeP19426 Gm8495-201ENSMUST00000188740 694 ntBASIC19.22■□□□□ 0.67
NelfeP19426 Gm43060-201ENSMUST00000200621 289 ntBASIC19.22■□□□□ 0.67
NelfeP19426 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NelfeP19426 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.21■□□□□ 0.67
NelfeP19426 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NelfeP19426 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NelfeP19426 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NelfeP19426 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NelfeP19426 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.2■□□□□ 0.66
NelfeP19426 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.2■□□□□ 0.66
NelfeP19426 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.2■□□□□ 0.66
NelfeP19426 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NelfeP19426 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NelfeP19426 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
NelfeP19426 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NelfeP19426 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NelfeP19426 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NelfeP19426 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NelfeP19426 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NelfeP19426 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
NelfeP19426 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NelfeP19426 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
NelfeP19426 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
NelfeP19426 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NelfeP19426 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NelfeP19426 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NelfeP19426 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NelfeP19426 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NelfeP19426 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NelfeP19426 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NelfeP19426 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NelfeP19426 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NelfeP19426 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NelfeP19426 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NelfeP19426 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NelfeP19426 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NelfeP19426 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NelfeP19426 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NelfeP19426 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
NelfeP19426 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NelfeP19426 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NelfeP19426 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms