Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm10493-201ENSMUST00000097270 612 ntBASIC29.6■■■□□ 2.33
NclP09405 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
NclP09405 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC29.59■■■□□ 2.33
NclP09405 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
NclP09405 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC29.59■■■□□ 2.33
NclP09405 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NclP09405 AC124392.1-201ENSMUST00000225172 5324 ntBASIC29.58■■■□□ 2.33
NclP09405 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
NclP09405 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC29.58■■■□□ 2.33
NclP09405 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NclP09405 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
NclP09405 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
NclP09405 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NclP09405 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
NclP09405 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NclP09405 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
NclP09405 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NclP09405 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NclP09405 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
NclP09405 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC29.55■■■□□ 2.32
NclP09405 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
NclP09405 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NclP09405 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC29.55■■■□□ 2.32
NclP09405 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
NclP09405 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NclP09405 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
NclP09405 Gm11421-201ENSMUST00000122124 294 ntBASIC29.54■■■□□ 2.32
NclP09405 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC29.54■■■□□ 2.32
NclP09405 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC29.54■■■□□ 2.32
NclP09405 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NclP09405 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NclP09405 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC29.53■■■□□ 2.32
NclP09405 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC29.53■■■□□ 2.32
NclP09405 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
NclP09405 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
NclP09405 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NclP09405 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC29.52■■■□□ 2.32
NclP09405 Gm38160-201ENSMUST00000193090 2499 ntBASIC29.52■■■□□ 2.32
NclP09405 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
NclP09405 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
NclP09405 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC29.51■■■□□ 2.32
NclP09405 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.31
NclP09405 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NclP09405 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NclP09405 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NclP09405 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NclP09405 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NclP09405 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
NclP09405 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NclP09405 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
NclP09405 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NclP09405 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
NclP09405 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NclP09405 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC29.49■■■□□ 2.31
NclP09405 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
NclP09405 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC29.49■■■□□ 2.31
NclP09405 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
NclP09405 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
NclP09405 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NclP09405 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC29.49■■■□□ 2.31
NclP09405 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
NclP09405 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NclP09405 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NclP09405 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NclP09405 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
NclP09405 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Gm10129-202ENSMUST00000193100 1316 ntBASIC29.47■■■□□ 2.31
NclP09405 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NclP09405 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NclP09405 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NclP09405 AC099934.2-201ENSMUST00000196389 70 ntBASIC29.46■■■□□ 2.31
NclP09405 AC156953.1-201ENSMUST00000196953 70 ntBASIC29.46■■■□□ 2.31
NclP09405 AC157822.2-201ENSMUST00000200291 70 ntBASIC29.46■■■□□ 2.31
NclP09405 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
NclP09405 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NclP09405 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
NclP09405 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
NclP09405 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NclP09405 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC29.45■■■□□ 2.31
NclP09405 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC29.45■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms