Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cdh16O88338 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdh16O88338 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh16O88338 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh16O88338 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cdh16O88338 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh16O88338 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Cap2-205ENSMUST00000225824 1634 ntBASIC19.42■□□□□ 0.7
Cdh16O88338 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cdh16O88338 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh16O88338 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdh16O88338 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Cdh16O88338 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdh16O88338 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh16O88338 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cdh16O88338 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh16O88338 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh16O88338 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdh16O88338 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh16O88338 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh16O88338 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cdh16O88338 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.4■□□□□ 0.7
Cdh16O88338 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdh16O88338 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh16O88338 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.39■□□□□ 0.7
Cdh16O88338 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh16O88338 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
Cdh16O88338 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh16O88338 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdh16O88338 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh16O88338 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh16O88338 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh16O88338 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh16O88338 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh16O88338 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdh16O88338 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdh16O88338 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh16O88338 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdh16O88338 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh16O88338 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh16O88338 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.38■□□□□ 0.69
Cdh16O88338 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Cdh16O88338 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh16O88338 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh16O88338 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.37■□□□□ 0.69
Cdh16O88338 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdh16O88338 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.37■□□□□ 0.69
Cdh16O88338 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdh16O88338 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh16O88338 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cdh16O88338 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.36■□□□□ 0.69
Cdh16O88338 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Cdh16O88338 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdh16O88338 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh16O88338 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh16O88338 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdh16O88338 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh16O88338 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh16O88338 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.35■□□□□ 0.69
Cdh16O88338 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cdh16O88338 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cdh16O88338 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.35■□□□□ 0.69
Cdh16O88338 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh16O88338 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms