Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BckdkO55028 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
BckdkO55028 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BckdkO55028 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BckdkO55028 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
BckdkO55028 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BckdkO55028 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BckdkO55028 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BckdkO55028 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BckdkO55028 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BckdkO55028 Gm7143-201ENSMUST00000222811 859 ntBASIC18.38■□□□□ 0.53
BckdkO55028 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BckdkO55028 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.38■□□□□ 0.53
BckdkO55028 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BckdkO55028 Iqck-206ENSMUST00000208658 2891 ntBASIC18.37■□□□□ 0.53
BckdkO55028 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BckdkO55028 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BckdkO55028 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BckdkO55028 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.37■□□□□ 0.53
BckdkO55028 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
BckdkO55028 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BckdkO55028 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BckdkO55028 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BckdkO55028 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BckdkO55028 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.36■□□□□ 0.53
BckdkO55028 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.36■□□□□ 0.53
BckdkO55028 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
BckdkO55028 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BckdkO55028 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.35■□□□□ 0.53
BckdkO55028 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BckdkO55028 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BckdkO55028 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.34■□□□□ 0.53
BckdkO55028 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.34■□□□□ 0.53
BckdkO55028 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Serp2-204ENSMUST00000228055 705 ntBASIC18.34■□□□□ 0.53
BckdkO55028 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
BckdkO55028 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BckdkO55028 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.33■□□□□ 0.53
BckdkO55028 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
BckdkO55028 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.33■□□□□ 0.52
BckdkO55028 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BckdkO55028 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BckdkO55028 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
BckdkO55028 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.33■□□□□ 0.52
BckdkO55028 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BckdkO55028 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BckdkO55028 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
BckdkO55028 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BckdkO55028 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BckdkO55028 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.32■□□□□ 0.52
BckdkO55028 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BckdkO55028 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BckdkO55028 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms