Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Hps1O08983 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.3■□□□□ 0.52
Hps1O08983 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hps1O08983 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hps1O08983 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hps1O08983 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.29■□□□□ 0.52
Hps1O08983 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hps1O08983 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hps1O08983 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.29■□□□□ 0.52
Hps1O08983 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hps1O08983 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hps1O08983 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hps1O08983 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hps1O08983 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Hps1O08983 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hps1O08983 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.28■□□□□ 0.52
Hps1O08983 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.28■□□□□ 0.52
Hps1O08983 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.28■□□□□ 0.52
Hps1O08983 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hps1O08983 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hps1O08983 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hps1O08983 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.27■□□□□ 0.52
Hps1O08983 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hps1O08983 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Hps1O08983 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hps1O08983 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hps1O08983 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hps1O08983 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hps1O08983 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hps1O08983 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.26■□□□□ 0.51
Hps1O08983 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps1O08983 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hps1O08983 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.25■□□□□ 0.51
Hps1O08983 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hps1O08983 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Hps1O08983 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps1O08983 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.24■□□□□ 0.51
Hps1O08983 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.24■□□□□ 0.51
Hps1O08983 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.24■□□□□ 0.51
Hps1O08983 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hps1O08983 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps1O08983 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.23■□□□□ 0.51
Hps1O08983 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps1O08983 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps1O08983 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps1O08983 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hps1O08983 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hps1O08983 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps1O08983 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Hps1O08983 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps1O08983 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps1O08983 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.22■□□□□ 0.51
Hps1O08983 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps1O08983 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms