Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Gm9988-201ENSMUST00000069786 435 ntBASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm11236J3QMS7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21■□□□□ 0.95
Gm11236J3QMS7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21■□□□□ 0.95
Gm11236J3QMS7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21■□□□□ 0.95
Gm11236J3QMS7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11236J3QMS7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11236J3QMS7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11236J3QMS7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11236J3QMS7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11236J3QMS7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm11236J3QMS7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11236J3QMS7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Gm13234-201ENSMUST00000120010 747 ntBASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm11236J3QMS7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11236J3QMS7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11236J3QMS7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11236J3QMS7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Reep4-203ENSMUST00000226563 1444 ntBASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11236J3QMS7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11236J3QMS7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms