Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 AL672049.1-201ENSMUST00000197943 91 ntBASIC9.87□□□□□ -0.83
Rnf213E9Q555 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rnf213E9Q555 Gm7290-201ENSMUST00000104990 617 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm12918-201ENSMUST00000120234 636 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm15710-201ENSMUST00000121821 636 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm5075-201ENSMUST00000196916 622 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm13534-201ENSMUST00000121169 513 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rnf213E9Q555 Gm38205-201ENSMUST00000192243 258 ntBASIC9.86□□□□□ -0.83
Rnf213E9Q555 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rnf213E9Q555 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rnf213E9Q555 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rnf213E9Q555 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms