Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC11.55□□□□□ -0.56
Herc1E9PZP8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.55□□□□□ -0.56
Herc1E9PZP8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.54□□□□□ -0.56
Herc1E9PZP8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Herc1E9PZP8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Mir5122-201ENSMUST00000175004 89 ntBASIC11.53□□□□□ -0.56
Herc1E9PZP8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Herc1E9PZP8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC11.53□□□□□ -0.56
Herc1E9PZP8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.53□□□□□ -0.56
Herc1E9PZP8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.53□□□□□ -0.56
Herc1E9PZP8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Herc1E9PZP8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Herc1E9PZP8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC11.52□□□□□ -0.56
Herc1E9PZP8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Herc1E9PZP8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Herc1E9PZP8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.52□□□□□ -0.57
Herc1E9PZP8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Herc1E9PZP8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Herc1E9PZP8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Herc1E9PZP8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Herc1E9PZP8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Herc1E9PZP8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.51□□□□□ -0.57
Herc1E9PZP8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.51□□□□□ -0.57
Herc1E9PZP8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.51□□□□□ -0.57
Herc1E9PZP8 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.51□□□□□ -0.57
Herc1E9PZP8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Herc1E9PZP8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Herc1E9PZP8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Herc1E9PZP8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.49□□□□□ -0.57
Herc1E9PZP8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Gm10698-201ENSMUST00000182663 604 ntBASIC11.49□□□□□ -0.57
Herc1E9PZP8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.49□□□□□ -0.57
Herc1E9PZP8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Herc1E9PZP8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.48□□□□□ -0.57
Herc1E9PZP8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Herc1E9PZP8 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.48□□□□□ -0.57
Herc1E9PZP8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms