Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col9a3A2ACT7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col9a3A2ACT7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a3A2ACT7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a3A2ACT7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a3A2ACT7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.59■□□□□ 0.73
Col9a3A2ACT7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a3A2ACT7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col9a3A2ACT7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col9a3A2ACT7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col9a3A2ACT7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a3A2ACT7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a3A2ACT7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a3A2ACT7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a3A2ACT7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a3A2ACT7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Gm12933-201ENSMUST00000120203 872 ntBASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.55■□□□□ 0.72
Col9a3A2ACT7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a3A2ACT7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col9a3A2ACT7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Gm27801-201ENSMUST00000184174 223 ntBASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Gm7514-201ENSMUST00000209475 934 ntBASIC19.53■□□□□ 0.72
Col9a3A2ACT7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a3A2ACT7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a3A2ACT7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a3A2ACT7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.52■□□□□ 0.72
Col9a3A2ACT7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col9a3A2ACT7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Col9a3A2ACT7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col9a3A2ACT7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a3A2ACT7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a3A2ACT7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a3A2ACT7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.51■□□□□ 0.71
Col9a3A2ACT7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a3A2ACT7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a3A2ACT7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms