Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
A0A1L1SQF0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
A0A1L1SQF0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
A0A1L1SQF0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
A0A1L1SQF0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A0A1L1SQF0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A0A1L1SQF0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.41■■□□□ 1.18
A0A1L1SQF0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A0A1L1SQF0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
A0A1L1SQF0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.39■■□□□ 1.18
A0A1L1SQF0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.39■■□□□ 1.17
A0A1L1SQF0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
A0A1L1SQF0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Golph3-202ENSMUST00000226517 2359 ntBASIC22.38■■□□□ 1.17
A0A1L1SQF0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
A0A1L1SQF0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
A0A1L1SQF0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
A0A1L1SQF0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Mir6236-201ENSMUST00000184437 123 ntBASIC22.36■■□□□ 1.17
A0A1L1SQF0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
A0A1L1SQF0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.35■■□□□ 1.17
A0A1L1SQF0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms