Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7-5A0A0G2JFX6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Mir6236-201ENSMUST00000184437 123 ntBASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-5A0A0G2JFX6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Gm12821-201ENSMUST00000120022 600 ntBASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Trav7-5A0A0G2JFX6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-5A0A0G2JFX6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7-5A0A0G2JFX6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-5A0A0G2JFX6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7-5A0A0G2JFX6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-5A0A0G2JFX6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Gm21956-201ENSMUST00000179946 522 ntBASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-5A0A0G2JFX6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms