Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm22238-201ENSMUST00000175222 88 ntBASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-7A0A075B6B0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-7A0A075B6B0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav6d-7A0A075B6B0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm13241-201ENSMUST00000094493 780 ntBASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-7A0A075B6B0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm9847-201ENSMUST00000052528 599 ntBASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-7A0A075B6B0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trav6d-7A0A075B6B0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-7A0A075B6B0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-7A0A075B6B0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav6d-7A0A075B6B0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-7A0A075B6B0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms