Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-1A0A075B5Z8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-1A0A075B5Z8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-1A0A075B5Z8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav6-1A0A075B5Z8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-1A0A075B5Z8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm7143-201ENSMUST00000222811 859 ntBASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-1A0A075B5Z8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-1A0A075B5Z8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-1A0A075B5Z8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-1A0A075B5Z8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav6-1A0A075B5Z8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms