Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1S4R1E0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H2afb1S4R1E0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb1S4R1E0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb1S4R1E0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.03■□□□□ 0.48
H2afb1S4R1E0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
H2afb1S4R1E0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2afb1S4R1E0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2afb1S4R1E0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb1S4R1E0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb1S4R1E0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afb1S4R1E0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afb1S4R1E0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18■□□□□ 0.47
H2afb1S4R1E0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18■□□□□ 0.47
H2afb1S4R1E0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18■□□□□ 0.47
H2afb1S4R1E0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb1S4R1E0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb1S4R1E0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
H2afb1S4R1E0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afb1S4R1E0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afb1S4R1E0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afb1S4R1E0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms