Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Chrna6Q9R0W9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna6Q9R0W9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna6Q9R0W9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna6Q9R0W9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna6Q9R0W9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna6Q9R0W9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna6Q9R0W9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chrna6Q9R0W9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Chrna6Q9R0W9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.32■□□□□ 0.84
Chrna6Q9R0W9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna6Q9R0W9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna6Q9R0W9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Mir7075-201ENSMUST00000184187 82 ntBASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna6Q9R0W9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Spcs1-204ENSMUST00000226782 949 ntBASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna6Q9R0W9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna6Q9R0W9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna6Q9R0W9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Chrna6Q9R0W9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna6Q9R0W9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna6Q9R0W9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna6Q9R0W9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna6Q9R0W9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
Chrna6Q9R0W9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms