Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d3cQ9QZS8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sh2d3cQ9QZS8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sh2d3cQ9QZS8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sh2d3cQ9QZS8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
Sh2d3cQ9QZS8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d3cQ9QZS8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d3cQ9QZS8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sh2d3cQ9QZS8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh2d3cQ9QZS8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d3cQ9QZS8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d3cQ9QZS8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d3cQ9QZS8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d3cQ9QZS8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d3cQ9QZS8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d3cQ9QZS8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sh2d3cQ9QZS8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d3cQ9QZS8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d3cQ9QZS8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d3cQ9QZS8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d3cQ9QZS8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d3cQ9QZS8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d3cQ9QZS8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sh2d3cQ9QZS8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d3cQ9QZS8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms