Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.74■□□□□ 0.75
Trim33Q99PP7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.73■□□□□ 0.75
Trim33Q99PP7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.73■□□□□ 0.75
Trim33Q99PP7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim33Q99PP7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim33Q99PP7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim33Q99PP7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim33Q99PP7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim33Q99PP7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Trim33Q99PP7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim33Q99PP7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.66■□□□□ 0.74
Trim33Q99PP7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim33Q99PP7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim33Q99PP7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.64■□□□□ 0.73
Trim33Q99PP7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms