Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd4Q8CC84 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lysmd4Q8CC84 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lysmd4Q8CC84 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd4Q8CC84 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.96■□□□□ 0.46
Lysmd4Q8CC84 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lysmd4Q8CC84 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd4Q8CC84 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd4Q8CC84 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.93■□□□□ 0.46
Lysmd4Q8CC84 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd4Q8CC84 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd4Q8CC84 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lysmd4Q8CC84 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lysmd4Q8CC84 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd4Q8CC84 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lysmd4Q8CC84 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms