Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Nek11Q8C0Q4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.82■■□□□ 1.4
Nek11Q8C0Q4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek11Q8C0Q4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.8■■□□□ 1.4
Nek11Q8C0Q4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek11Q8C0Q4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Nek11Q8C0Q4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek11Q8C0Q4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek11Q8C0Q4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek11Q8C0Q4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nek11Q8C0Q4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.74■■□□□ 1.39
Nek11Q8C0Q4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.74■■□□□ 1.39
Nek11Q8C0Q4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nek11Q8C0Q4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nek11Q8C0Q4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms