Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trnp1Q80ZI1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trnp1Q80ZI1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trnp1Q80ZI1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trnp1Q80ZI1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trnp1Q80ZI1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.93■■□□□ 1.26
Trnp1Q80ZI1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trnp1Q80ZI1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trnp1Q80ZI1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trnp1Q80ZI1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trnp1Q80ZI1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trnp1Q80ZI1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trnp1Q80ZI1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trnp1Q80ZI1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Gm20760-201ENSMUST00000179197 648 ntBASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Trnp1Q80ZI1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trnp1Q80ZI1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trnp1Q80ZI1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Trnp1Q80ZI1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trnp1Q80ZI1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Gm22240-201ENSMUST00000175225 82 ntBASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.88■■□□□ 1.25
Trnp1Q80ZI1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Trnp1Q80ZI1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trnp1Q80ZI1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trnp1Q80ZI1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trnp1Q80ZI1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Trnp1Q80ZI1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.84■■□□□ 1.25
Trnp1Q80ZI1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trnp1Q80ZI1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trnp1Q80ZI1 Gm12527-201ENSMUST00000117967 564 ntBASIC22.83■■□□□ 1.25
Trnp1Q80ZI1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trnp1Q80ZI1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Trnp1Q80ZI1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trnp1Q80ZI1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms