Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a7Q6PGE7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a7Q6PGE7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.16■□□□□ 0.5
Slc6a7Q6PGE7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a7Q6PGE7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Slc6a7Q6PGE7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a7Q6PGE7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.14■□□□□ 0.5
Slc6a7Q6PGE7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a7Q6PGE7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a7Q6PGE7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a7Q6PGE7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a7Q6PGE7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a7Q6PGE7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a7Q6PGE7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms