Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VcanQ62059 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VcanQ62059 Gm10819-201ENSMUST00000099988 561 ntBASIC19.13■□□□□ 0.65
VcanQ62059 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VcanQ62059 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VcanQ62059 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
VcanQ62059 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VcanQ62059 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.12■□□□□ 0.65
VcanQ62059 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VcanQ62059 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.11■□□□□ 0.65
VcanQ62059 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VcanQ62059 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Gm15565-201ENSMUST00000118890 427 ntBASIC19.11■□□□□ 0.65
VcanQ62059 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.11■□□□□ 0.65
VcanQ62059 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.11■□□□□ 0.65
VcanQ62059 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.11■□□□□ 0.65
VcanQ62059 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.11■□□□□ 0.65
VcanQ62059 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VcanQ62059 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VcanQ62059 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VcanQ62059 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VcanQ62059 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VcanQ62059 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.09■□□□□ 0.65
VcanQ62059 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VcanQ62059 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VcanQ62059 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.09■□□□□ 0.65
VcanQ62059 Gm715-201ENSMUST00000117865 831 ntBASIC19.09■□□□□ 0.65
VcanQ62059 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VcanQ62059 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VcanQ62059 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
VcanQ62059 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VcanQ62059 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.08■□□□□ 0.65
VcanQ62059 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.08■□□□□ 0.65
VcanQ62059 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.08■□□□□ 0.65
VcanQ62059 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.08■□□□□ 0.65
VcanQ62059 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VcanQ62059 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VcanQ62059 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VcanQ62059 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VcanQ62059 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VcanQ62059 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VcanQ62059 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.07■□□□□ 0.64
VcanQ62059 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VcanQ62059 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.07■□□□□ 0.64
VcanQ62059 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VcanQ62059 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VcanQ62059 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.06■□□□□ 0.64
VcanQ62059 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VcanQ62059 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VcanQ62059 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VcanQ62059 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.06■□□□□ 0.64
VcanQ62059 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.06■□□□□ 0.64
VcanQ62059 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VcanQ62059 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VcanQ62059 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VcanQ62059 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
VcanQ62059 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.05■□□□□ 0.64
VcanQ62059 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.05■□□□□ 0.64
VcanQ62059 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms