Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clns1aQ61189 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.08■□□□□ 0.32
Clns1aQ61189 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Clns1aQ61189 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clns1aQ61189 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clns1aQ61189 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Clns1aQ61189 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.06■□□□□ 0.32
Clns1aQ61189 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.06■□□□□ 0.32
Clns1aQ61189 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clns1aQ61189 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Clns1aQ61189 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.05■□□□□ 0.32
Clns1aQ61189 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clns1aQ61189 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clns1aQ61189 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clns1aQ61189 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clns1aQ61189 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.04■□□□□ 0.32
Clns1aQ61189 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.04■□□□□ 0.32
Clns1aQ61189 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clns1aQ61189 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
Clns1aQ61189 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clns1aQ61189 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clns1aQ61189 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.03■□□□□ 0.32
Clns1aQ61189 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clns1aQ61189 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clns1aQ61189 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.02■□□□□ 0.32
Clns1aQ61189 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clns1aQ61189 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clns1aQ61189 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clns1aQ61189 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clns1aQ61189 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clns1aQ61189 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clns1aQ61189 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clns1aQ61189 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Clns1aQ61189 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clns1aQ61189 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clns1aQ61189 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clns1aQ61189 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clns1aQ61189 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Clns1aQ61189 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clns1aQ61189 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Clns1aQ61189 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clns1aQ61189 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clns1aQ61189 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clns1aQ61189 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clns1aQ61189 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clns1aQ61189 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.99■□□□□ 0.31
Clns1aQ61189 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Clns1aQ61189 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms