Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Gm43137-201ENSMUST00000198052 594 ntBASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Uspl1Q3ULM6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Uspl1Q3ULM6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Uspl1Q3ULM6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Uspl1Q3ULM6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Uspl1Q3ULM6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Gm27454-201ENSMUST00000185090 204 ntBASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uspl1Q3ULM6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Uspl1Q3ULM6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Uspl1Q3ULM6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Uspl1Q3ULM6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Uspl1Q3ULM6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Uspl1Q3ULM6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Uspl1Q3ULM6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Uspl1Q3ULM6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
Uspl1Q3ULM6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Uspl1Q3ULM6 Gm12251-201ENSMUST00000117893 792 ntBASIC26■■□□□ 1.75
Uspl1Q3ULM6 Gm12821-201ENSMUST00000120022 600 ntBASIC26■■□□□ 1.75
Uspl1Q3ULM6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26■■□□□ 1.75
Uspl1Q3ULM6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Uspl1Q3ULM6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Uspl1Q3ULM6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Uspl1Q3ULM6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.98■■□□□ 1.75
Uspl1Q3ULM6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Uspl1Q3ULM6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC25.96■■□□□ 1.75
Uspl1Q3ULM6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Uspl1Q3ULM6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Uspl1Q3ULM6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Uspl1Q3ULM6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms