Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brf2Q3UAW9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Brf2Q3UAW9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Brf2Q3UAW9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Brf2Q3UAW9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Brf2Q3UAW9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Rps24-207ENSMUST00000224568 714 ntBASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brf2Q3UAW9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Gm22238-201ENSMUST00000175222 88 ntBASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Gm43530-201ENSMUST00000195920 274 ntBASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brf2Q3UAW9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brf2Q3UAW9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brf2Q3UAW9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Gm14117-201ENSMUST00000122417 843 ntBASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.79■□□□□ 0.6
Brf2Q3UAW9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
Brf2Q3UAW9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brf2Q3UAW9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.77■□□□□ 0.6
Brf2Q3UAW9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brf2Q3UAW9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Brf2Q3UAW9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Brf2Q3UAW9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brf2Q3UAW9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brf2Q3UAW9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brf2Q3UAW9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms