Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.6■□□□□ 0.25
Trim63Q38HM4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim63Q38HM4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim63Q38HM4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim63Q38HM4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trim63Q38HM4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim63Q38HM4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trim63Q38HM4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim63Q38HM4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim63Q38HM4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim63Q38HM4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim63Q38HM4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.57■□□□□ 0.24
Trim63Q38HM4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.57■□□□□ 0.24
Trim63Q38HM4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim63Q38HM4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim63Q38HM4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim63Q38HM4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim63Q38HM4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim63Q38HM4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.54■□□□□ 0.24
Trim63Q38HM4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Golph3-205ENSMUST00000228671 2842 ntBASIC16.54■□□□□ 0.24
Trim63Q38HM4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim63Q38HM4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.54■□□□□ 0.24
Trim63Q38HM4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim63Q38HM4 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.54■□□□□ 0.24
Trim63Q38HM4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim63Q38HM4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim63Q38HM4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim63Q38HM4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim63Q38HM4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim63Q38HM4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms