Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd3P97770 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd3P97770 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd3P97770 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd3P97770 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.27■□□□□ 0.84
Thumpd3P97770 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.27■□□□□ 0.84
Thumpd3P97770 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thumpd3P97770 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Thumpd3P97770 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.26■□□□□ 0.83
Thumpd3P97770 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.26■□□□□ 0.83
Thumpd3P97770 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.26■□□□□ 0.83
Thumpd3P97770 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Thumpd3P97770 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.26■□□□□ 0.83
Thumpd3P97770 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Thumpd3P97770 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Thumpd3P97770 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.25■□□□□ 0.83
Thumpd3P97770 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.25■□□□□ 0.83
Thumpd3P97770 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Thumpd3P97770 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd3P97770 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd3P97770 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.24■□□□□ 0.83
Thumpd3P97770 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.24■□□□□ 0.83
Thumpd3P97770 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd3P97770 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Thumpd3P97770 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd3P97770 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Thumpd3P97770 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.23■□□□□ 0.83
Thumpd3P97770 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Thumpd3P97770 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd3P97770 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd3P97770 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.22■□□□□ 0.83
Thumpd3P97770 Gm40881-201ENSMUST00000223397 166 ntBASIC20.22■□□□□ 0.83
Thumpd3P97770 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Thumpd3P97770 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd3P97770 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd3P97770 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Thumpd3P97770 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Thumpd3P97770 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Thumpd3P97770 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.21■□□□□ 0.83
Thumpd3P97770 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.21■□□□□ 0.83
Thumpd3P97770 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Thumpd3P97770 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.2■□□□□ 0.82
Thumpd3P97770 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Thumpd3P97770 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.2■□□□□ 0.82
Thumpd3P97770 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.2■□□□□ 0.82
Thumpd3P97770 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Thumpd3P97770 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Thumpd3P97770 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Thumpd3P97770 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thumpd3P97770 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Thumpd3P97770 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thumpd3P97770 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Thumpd3P97770 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Thumpd3P97770 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms