Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxd8P23463 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.92■□□□□ 0.94
Hoxd8P23463 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hoxd8P23463 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxd8P23463 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
Hoxd8P23463 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxd8P23463 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxd8P23463 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxd8P23463 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxd8P23463 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hoxd8P23463 Gm18671-201ENSMUST00000214826 683 ntBASIC20.91■□□□□ 0.94
Hoxd8P23463 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxd8P23463 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxd8P23463 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxd8P23463 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxd8P23463 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.9■□□□□ 0.94
Hoxd8P23463 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Hoxd8P23463 Gm37179-201ENSMUST00000194862 823 ntBASIC20.9■□□□□ 0.94
Hoxd8P23463 AV356131-201ENSMUST00000206201 750 ntBASIC20.9■□□□□ 0.94
Hoxd8P23463 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxd8P23463 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hoxd8P23463 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxd8P23463 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxd8P23463 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hoxd8P23463 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxd8P23463 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Hoxd8P23463 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Hoxd8P23463 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.89■□□□□ 0.93
Hoxd8P23463 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hoxd8P23463 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxd8P23463 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxd8P23463 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
Hoxd8P23463 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.87■□□□□ 0.93
Hoxd8P23463 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.87■□□□□ 0.93
Hoxd8P23463 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxd8P23463 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxd8P23463 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxd8P23463 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxd8P23463 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.86■□□□□ 0.93
Hoxd8P23463 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxd8P23463 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hoxd8P23463 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Gm27801-201ENSMUST00000184174 223 ntBASIC20.85■□□□□ 0.93
Hoxd8P23463 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxd8P23463 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.85■□□□□ 0.93
Hoxd8P23463 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxd8P23463 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hoxd8P23463 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Hoxd8P23463 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxd8P23463 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxd8P23463 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxd8P23463 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxd8P23463 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxd8P23463 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.83■□□□□ 0.93
Hoxd8P23463 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.83■□□□□ 0.93
Hoxd8P23463 Gm42778-201ENSMUST00000199644 553 ntBASIC20.83■□□□□ 0.93
Hoxd8P23463 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.83■□□□□ 0.93
Hoxd8P23463 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxd8P23463 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxd8P23463 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.83■□□□□ 0.92
Hoxd8P23463 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxd8P23463 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.82■□□□□ 0.92
Hoxd8P23463 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxd8P23463 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms